STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAU_3606Putative cation/multidrug efflux pump; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (399 aa)    
Predicted Functional Partners:
GAU_3605
Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   0.983
GAU_2990
Multidrug resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  0.960
GAU_2989
Outer membrane efflux protein.
 
  0.891
GAU_2641
Outer membrane efflux protein.
 
  0.890
GAU_0531
Outer membrane efflux protein.
  
  0.875
GAU_0524
Outer membrane efflux protein.
  
  0.871
GAU_0842
Outer membrane efflux protein.
   
  0.849
GAU_1148
Outer membrane efflux protein.
   
  0.849
GAU_0522
Multidrug resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.722
GAU_2883
Heavy metal efflux pump; Protein synonym: cation efflux system protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   0.653
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
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