STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAU_3780Hypothetical membrane protein. (262 aa)    
Predicted Functional Partners:
GAU_3778
Iron-sulfur binding protein.
 
   
 0.951
fixN/fixO
Cytochrome c oxidase cbb3-type subunit I/mono-heme subunit; Bifunctional protein; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.940
GAU_3777
Cytochrome c oxidase cbb3-type subunit III.
 
     0.924
fixI
Cation-transporting P-type ATPase.
 
   
 0.907
fixS
FixS protein.
 
     0.876
GAU_3779
Hypothetical protein.
       0.799
GAU_3776
Putative cbb3 oxidase subunit IV.
       0.697
hemN
Protein synonym: coprogen oxidase; protein synonym: coproporphyrinogenase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
   
 0.561
GAU_3774
Hypothetical protein.
       0.485
GAU_3773
Putative acetyltransferase.
       0.476
Your Current Organism:
Gemmatimonas aurantiaca
NCBI taxonomy Id: 379066
Other names: G. aurantiaca T-27, Gemmatimonas aurantiaca DSM 14586, Gemmatimonas aurantiaca JCM 11422, Gemmatimonas aurantiaca NBRC 100505, Gemmatimonas aurantiaca T-27, Gemmatimonas aurantiaca str. T-27, Gemmatimonas aurantiaca strain T-27
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.