Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KIE19006.1 | KIE19186.1 | SE23_18545 | SE23_19395 | Molybdopterin biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family. | Deoxycytidine triphosphate deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.589 |
KIE19162.1 | KIE19163.1 | SE23_19385 | SE23_19390 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit Tim44; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.612 |
KIE19162.1 | KIE19186.1 | SE23_19385 | SE23_19395 | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Deoxycytidine triphosphate deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.408 |
KIE19163.1 | KIE19162.1 | SE23_19390 | SE23_19385 | Preprotein translocase subunit Tim44; Derived by automated computational analysis using gene prediction method: Protein Homology. | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.612 |
KIE19163.1 | KIE19186.1 | SE23_19390 | SE23_19395 | Preprotein translocase subunit Tim44; Derived by automated computational analysis using gene prediction method: Protein Homology. | Deoxycytidine triphosphate deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.534 |
KIE19186.1 | KIE19006.1 | SE23_19395 | SE23_18545 | Deoxycytidine triphosphate deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Molybdopterin biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family. | 0.589 |
KIE19186.1 | KIE19162.1 | SE23_19395 | SE23_19385 | Deoxycytidine triphosphate deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.408 |
KIE19186.1 | KIE19163.1 | SE23_19395 | SE23_19390 | Deoxycytidine triphosphate deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Preprotein translocase subunit Tim44; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.534 |
KIE19186.1 | mazG | SE23_19395 | SE23_11135 | Deoxycytidine triphosphate deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nucleoside triphosphate hydrolase; Functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.574 |
KIE19186.1 | ppnK | SE23_19395 | SE23_02170 | Deoxycytidine triphosphate deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Inorganic polyphosphate kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.626 |
mazG | KIE19186.1 | SE23_11135 | SE23_19395 | Nucleoside triphosphate hydrolase; Functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; Derived by automated computational analysis using gene prediction method: Protein Homology. | Deoxycytidine triphosphate deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.574 |
mazG | ppnK | SE23_11135 | SE23_02170 | Nucleoside triphosphate hydrolase; Functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; Derived by automated computational analysis using gene prediction method: Protein Homology. | Inorganic polyphosphate kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.735 |
ppnK | KIE19186.1 | SE23_02170 | SE23_19395 | Inorganic polyphosphate kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | Deoxycytidine triphosphate deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.626 |
ppnK | mazG | SE23_02170 | SE23_11135 | Inorganic polyphosphate kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | Nucleoside triphosphate hydrolase; Functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.735 |