STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xerC_1Tyrosine recombinase XerC; Belongs to the 'phage' integrase family. (374 aa)    
Predicted Functional Partners:
xerC_2
Tyrosine recombinase XerC.
 
     0.765
xerS
Tyrosine recombinase XerS; Belongs to the 'phage' integrase family.
  
     0.593
xerC_11
Tyrosine recombinase XerC; Belongs to the 'phage' integrase family.
  
     0.564
xerC_9
Tyrosine recombinase XerC.
  
     0.554
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.547
xerD_1
Tyrosine recombinase XerD.
  
     0.489
xerC_10
Tyrosine recombinase XerC.
  
     0.489
xerC_6
Tyrosine recombinase XerC.
 
     0.421
xerD_4
Tyrosine recombinase XerD.
  
     0.412
xerD_8
Tyrosine recombinase XerD; Belongs to the 'phage' integrase family.
 
     0.411
Your Current Organism:
Mycolicibacterium chlorophenolicum
NCBI taxonomy Id: 37916
Other names: ATCC 49826, CIP 104189, DSM 43826, HAMBI 2278, IEGM 559, IFO 15527, JCM 7439, M. chlorophenolicum, Mycobacterium chlorophenolicum, Mycobacterium chlorophenolicus, Mycobacterium sp. ATCC 25793, NBRC 15527, NRRL B-16528, Rhodococcus chlorophenolicus, Rhodococcus chlorophenolicus (strain PCP-1), strain PCP-1, strain PCP-I
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