Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
baeS_1 | baeS_2 | MCHLDSM_00526 | MCHLDSM_02666 | Signal transduction histidine-protein kinase BaeS. | Signal transduction histidine-protein kinase BaeS. | 0.474 |
baeS_1 | baeS_4 | MCHLDSM_00526 | MCHLDSM_03868 | Signal transduction histidine-protein kinase BaeS. | Signal transduction histidine-protein kinase BaeS. | 0.473 |
baeS_1 | gmr_4 | MCHLDSM_00526 | MCHLDSM_06472 | Signal transduction histidine-protein kinase BaeS. | Cyclic di-GMP phosphodiesterase Gmr. | 0.914 |
baeS_1 | mprB | MCHLDSM_00526 | MCHLDSM_06852 | Signal transduction histidine-protein kinase BaeS. | Signal transduction histidine-protein kinase/phosphatase MprB. | 0.459 |
baeS_1 | regX3_3 | MCHLDSM_00526 | MCHLDSM_03818 | Signal transduction histidine-protein kinase BaeS. | Sensory transduction protein regX3. | 0.873 |
baeS_1 | senX3_1 | MCHLDSM_00526 | MCHLDSM_02577 | Signal transduction histidine-protein kinase BaeS. | Signal-transduction histidine kinase senX3. | 0.461 |
baeS_1 | senX3_2 | MCHLDSM_00526 | MCHLDSM_02967 | Signal transduction histidine-protein kinase BaeS. | Signal-transduction histidine kinase senX3. | 0.468 |
baeS_1 | todS | MCHLDSM_00526 | MCHLDSM_05850 | Signal transduction histidine-protein kinase BaeS. | Sensor histidine kinase TodS. | 0.964 |
baeS_1 | yegE_1 | MCHLDSM_00526 | MCHLDSM_01485 | Signal transduction histidine-protein kinase BaeS. | Putative diguanylate cyclase YegE. | 0.802 |
baeS_2 | baeS_1 | MCHLDSM_02666 | MCHLDSM_00526 | Signal transduction histidine-protein kinase BaeS. | Signal transduction histidine-protein kinase BaeS. | 0.474 |
baeS_2 | baeS_3 | MCHLDSM_02666 | MCHLDSM_03817 | Signal transduction histidine-protein kinase BaeS. | Signal transduction histidine-protein kinase BaeS. | 0.475 |
baeS_2 | gmr_4 | MCHLDSM_02666 | MCHLDSM_06472 | Signal transduction histidine-protein kinase BaeS. | Cyclic di-GMP phosphodiesterase Gmr. | 0.914 |
baeS_2 | mprB | MCHLDSM_02666 | MCHLDSM_06852 | Signal transduction histidine-protein kinase BaeS. | Signal transduction histidine-protein kinase/phosphatase MprB. | 0.463 |
baeS_2 | regX3_3 | MCHLDSM_02666 | MCHLDSM_03818 | Signal transduction histidine-protein kinase BaeS. | Sensory transduction protein regX3. | 0.876 |
baeS_2 | senX3_1 | MCHLDSM_02666 | MCHLDSM_02577 | Signal transduction histidine-protein kinase BaeS. | Signal-transduction histidine kinase senX3. | 0.459 |
baeS_2 | senX3_2 | MCHLDSM_02666 | MCHLDSM_02967 | Signal transduction histidine-protein kinase BaeS. | Signal-transduction histidine kinase senX3. | 0.468 |
baeS_2 | todS | MCHLDSM_02666 | MCHLDSM_05850 | Signal transduction histidine-protein kinase BaeS. | Sensor histidine kinase TodS. | 0.964 |
baeS_2 | yegE_1 | MCHLDSM_02666 | MCHLDSM_01485 | Signal transduction histidine-protein kinase BaeS. | Putative diguanylate cyclase YegE. | 0.802 |
baeS_3 | baeS_2 | MCHLDSM_03817 | MCHLDSM_02666 | Signal transduction histidine-protein kinase BaeS. | Signal transduction histidine-protein kinase BaeS. | 0.475 |
baeS_3 | baeS_4 | MCHLDSM_03817 | MCHLDSM_03868 | Signal transduction histidine-protein kinase BaeS. | Signal transduction histidine-protein kinase BaeS. | 0.475 |
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