STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpK_4Glycerol kinase. (355 aa)    
Predicted Functional Partners:
glpK_5
Glycerol kinase.
     0.992
mec
CysO-cysteine peptidase.
   
 0.976
mpa
Proteasome-associated ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis.
   
 0.969
ftsH_5
ATP-dependent zinc metalloprotease FtsH.
   
 0.969
prcB_1
Proteasome subunit beta precursor; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1B family.
   
 0.956
prcA
Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family.
   
 0.956
prcB_2
Proteasome subunit beta.
   
 0.956
glpD_3
Aerobic glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 0.924
glpD_1
Aerobic glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 0.890
glpD_2
Aerobic glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 0.883
Your Current Organism:
Mycolicibacterium chlorophenolicum
NCBI taxonomy Id: 37916
Other names: ATCC 49826, CIP 104189, DSM 43826, HAMBI 2278, IEGM 559, IFO 15527, JCM 7439, M. chlorophenolicum, Mycobacterium chlorophenolicum, Mycobacterium chlorophenolicus, Mycobacterium sp. ATCC 25793, NBRC 15527, NRRL B-16528, Rhodococcus chlorophenolicus, Rhodococcus chlorophenolicus (strain PCP-1), strain PCP-1, strain PCP-I
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