Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KMO67974.1 | KMO78622.1 | MCHLDSM_07233 | MCHLDSM_02543 | Tetratricopeptide repeat protein. | Immunogenic protein MPT64 precursor. | 0.959 |
KMO67974.1 | KMO82113.1 | MCHLDSM_07233 | MCHLDSM_01521 | Tetratricopeptide repeat protein. | Hypothetical protein. | 0.810 |
KMO67974.1 | alaS | MCHLDSM_07233 | MCHLDSM_02018 | Tetratricopeptide repeat protein. | Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.958 |
KMO67974.1 | ftsH_4 | MCHLDSM_07233 | MCHLDSM_07232 | Tetratricopeptide repeat protein. | ATP-dependent zinc metalloprotease FtsH; Belongs to the AAA ATPase family. | 0.893 |
KMO67974.1 | htpG | MCHLDSM_07233 | MCHLDSM_06127 | Tetratricopeptide repeat protein. | Chaperone protein HtpG; Molecular chaperone. Has ATPase activity. | 0.962 |
KMO67974.1 | kinE | MCHLDSM_07233 | MCHLDSM_04482 | Tetratricopeptide repeat protein. | Sporulation kinase E. | 0.834 |
KMO67974.1 | rpoA | MCHLDSM_07233 | MCHLDSM_04514 | Tetratricopeptide repeat protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.932 |
KMO67974.1 | rpoB | MCHLDSM_07233 | MCHLDSM_04326 | Tetratricopeptide repeat protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.869 |
KMO67974.1 | rpoZ | MCHLDSM_07233 | MCHLDSM_01990 | Tetratricopeptide repeat protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.876 |
KMO67974.1 | zraS | MCHLDSM_07233 | MCHLDSM_04481 | Tetratricopeptide repeat protein. | Sensor protein ZraS. | 0.834 |
KMO78622.1 | KMO67974.1 | MCHLDSM_02543 | MCHLDSM_07233 | Immunogenic protein MPT64 precursor. | Tetratricopeptide repeat protein. | 0.959 |
KMO78622.1 | alaS | MCHLDSM_02543 | MCHLDSM_02018 | Immunogenic protein MPT64 precursor. | Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.984 |
KMO78622.1 | kinE | MCHLDSM_02543 | MCHLDSM_04482 | Immunogenic protein MPT64 precursor. | Sporulation kinase E. | 0.564 |
KMO78622.1 | rpoA | MCHLDSM_02543 | MCHLDSM_04514 | Immunogenic protein MPT64 precursor. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.902 |
KMO78622.1 | rpoB | MCHLDSM_02543 | MCHLDSM_04326 | Immunogenic protein MPT64 precursor. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.877 |
KMO78622.1 | rpoZ | MCHLDSM_02543 | MCHLDSM_01990 | Immunogenic protein MPT64 precursor. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.865 |
KMO78622.1 | zraS | MCHLDSM_02543 | MCHLDSM_04481 | Immunogenic protein MPT64 precursor. | Sensor protein ZraS. | 0.564 |
KMO82113.1 | KMO67974.1 | MCHLDSM_01521 | MCHLDSM_07233 | Hypothetical protein. | Tetratricopeptide repeat protein. | 0.810 |
alaS | KMO67974.1 | MCHLDSM_02018 | MCHLDSM_07233 | Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | Tetratricopeptide repeat protein. | 0.958 |
alaS | KMO78622.1 | MCHLDSM_02018 | MCHLDSM_02543 | Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | Immunogenic protein MPT64 precursor. | 0.984 |
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