STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIJ35025.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)    
Predicted Functional Partners:
csp
Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.841
OIJ36128.1
RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.732
OIJ36042.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.678
OIJ36247.1
Phospholipid carrier-dependent glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.657
OIJ36991.1
dUTPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.601
OIJ36583.1
Histidine phosphatase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.568
OIJ35701.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.557
bacE
MFS transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.538
whiA
DNA-binding protein WhiA; Involved in cell division and chromosome segregation.
  
     0.531
OIJ35697.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.523
Your Current Organism:
Rothia kristinae
NCBI taxonomy Id: 37923
Other names: ATCC 27570, CCM 2690, CCUG 33026, CIP 81.69, DSM 20032, IEGM 390, IFO 15354, JCM 7237, Kocuria kristinae, Kocuria kristiniae, LMG 14215, LMG:14215, Micrococcus kristinae, Micrococcus kristiniae, NBRC 15354, NCTC 11038, NRRL B-14835, R. kristinae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.