STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM30791.1Hypothetical protein; Pfam:pfam01636 Phosphotransferase enzyme family. (317 aa)    
Predicted Functional Partners:
AMM30790.1
N-methyltryptophan oxidase; Pfam:pfam01266 FAD dependent oxidoreductase.
     
 0.758
AMM30789.1
Pfam:pfam00440 Bacterial regulatory proteins, tetR family.
       0.625
AMM34730.1
ABC transporter substrate-binding protein.
    
 0.594
AMM30792.1
Glycolate utilization protein; Pfam:pfam03928 Domain of unknown function (DUF336).
       0.572
AMM30881.1
Alpha-mannosidase; Pfam:pfam01074 Glycosyl hydrolases family 38 N-terminal domain.
  
    0.570
AMM30793.1
Pfam:pfam00202 Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
   0.499
AMM34131.1
Pfam:pfam04055 Radical SAM superfamily.
  
     0.485
AMM30878.1
Pfam:pfam02811 PHP domain.
  
     0.472
AMM30787.1
Pfam:pfam00324 Amino acid permease.
  
 
 0.449
AMM30788.1
Pfam:pfam13350 Tyrosine phosphatase family.
       0.411
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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