Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM30808.1Pfam:pfam02426 Muconolactone delta-isomerase. (92 aa)    
Predicted Functional Partners:
AMM30807.1
L-Ala-D/L-Glu epimerase; Pfam:pfam02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain.
 
 
 0.982
AMM30803.1
Benzoate 1,2-dioxygenase electron transfer component; Pfam:pfam00175 Oxidoreductase NAD-binding domain.
 
  
 0.934
AMM30800.1
Catechol 1,2-dioxygenase; Pfam:pfam00775 Dioxygenase.
 
  
 0.927
AMM34534.1
Pfam:pfam02627 Carboxymuconolactone decarboxylase family.
  
 
 0.918
AMM30802.1
Benzene 1,2-dioxygenase; Pfam:pfam00866 Ring hydroxylating beta subunit.
 
  
 0.916
AMM30801.1
Benzoate 1,2-dioxygenase subunit alpha; Pfam:pfam00355 Rieske [2Fe-2S] domain.
 
  
 0.870
AMM34535.1
Pfam:pfam12697 Alpha/beta hydrolase family.
 
 
 0.843
AMM30804.1
Pfam:pfam00106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
 0.840
AMM30805.1
Pfam:pfam00196 Bacterial regulatory proteins, luxR family.
 
     0.837
AMM30806.1
LysR family transcriptional regulator; Pfam:pfam03466 LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
 
   
 0.812
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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