Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM30851.1Inner-membrane translocator; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family. (338 aa)    
Predicted Functional Partners:
AMM30852.1
Ribose ABC transport system, ATP-binding protein RbsA; Pfam:pfam00005 ABC transporter.
 
 0.995
AMM30854.1
Periplasmic binding protein/LacI transcriptional regulator; Pfam:pfam13407 Periplasmic binding protein domain.
 
 0.991
AMM30839.1
Pfam:pfam00005 ABC transporter.
 
 0.980
AMM32183.1
Sugar ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
 0.980
AMM32182.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; Pfam:pfam13407 Periplasmic binding protein domain.
 
 0.961
AMM31650.1
Arabinose import ATP-binding protein AraG; Pfam:pfam00005 ABC transporter.
 
 
 0.906
AMM32041.1
Xylose ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
 
 0.904
AMM31649.1
Hypothetical protein; Pfam:pfam13407 Periplasmic binding protein domain.
 
 
 0.868
AMM30853.1
Inner-membrane translocator; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
    
0.836
rbsK
Carbohydrate kinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.583
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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