Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM30855.1Pfam:pfam06441 Epoxide hydrolase N terminus. (414 aa)    
Predicted Functional Partners:
AMM30856.1
Pfam:pfam05853 Prokaryotic protein of unknown function (DUF849).
       0.570
AMM30854.1
Periplasmic binding protein/LacI transcriptional regulator; Pfam:pfam13407 Periplasmic binding protein domain.
       0.440
AMM32953.1
Transcriptional regulator, HxlR family; Pfam:pfam01638 HxlR-like helix-turn-helix.
  
    0.428
AMM31541.1
Lipase/esterase; Pfam:pfam07859 alpha/beta hydrolase fold.
 
   
 0.403
AMM31612.1
Hypothetical protein; Pfam:pfam12796 Ankyrin repeats (3 copies).
  
 0.403
AMM33725.1
Ankyrin repeat-containing protein; Pfam:pfam12796 Ankyrin repeats (3 copies).
  
 0.403
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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