STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM30933.1Peptidase S53; Pfam:pfam09286 Pro-kumamolisin, activation domain. (532 aa)    
Predicted Functional Partners:
AMM33862.1
Phospholipase C; Pfam:pfam04185 Phosphoesterase family.
  
     0.691
AMM32261.1
Iron reductase; Pfam:pfam01794 Ferric reductase like transmembrane component.
  
     0.570
AMM33165.1
Chloride transporter, ClC family; Pfam:pfam00654 Voltage gated chloride channel.
  
     0.525
AMM34330.1
Pfam:pfam13520 Amino acid permease.
  
     0.513
AMM30932.1
Putative arsenite efflux pump; Pfam:pfam01758 Sodium Bile acid symporter family.
       0.512
AMM33420.1
Hypothetical protein; Pfam:pfam04185 Phosphoesterase family.
  
     0.503
AMM33566.1
Hypothetical protein; Pfam:pfam13515 Fusaric acid resistance protein-like.
  
     0.469
AMM31782.1
Phospholipase; Pfam:pfam04185 Phosphoesterase family.
  
     0.441
AMM32011.1
Kelch repeat-containing protein.
  
     0.406
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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