STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM30946.1Pfam:pfam03009 Glycerophosphoryl diester phosphodiesterase family. (256 aa)    
Predicted Functional Partners:
AMM31048.1
Pfam:pfam03009 Glycerophosphoryl diester phosphodiesterase family.
  
  
 
0.927
AMM30858.1
Pfam:pfam01266 FAD dependent oxidoreductase.
 
 0.702
AMM32725.1
Integral membrane protein; Pfam:pfam02588 Uncharacterized BCR, YitT family COG1284.
      0.685
AMM32799.1
Pfam:pfam01266 FAD dependent oxidoreductase.
  
 0.662
AMM30859.1
Glycerol kinase; Pfam:pfam00370 FGGY family of carbohydrate kinases, N-terminal domain.
 
  
 0.647
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.645
AMM30945.1
Pfam:pfam00293 NUDIX domain; Belongs to the Nudix hydrolase family.
 
    0.636
AMM30943.1
Pfam:pfam02567 Phenazine biosynthesis-like protein.
       0.565
AMM30944.1
Pfam:pfam02567 Phenazine biosynthesis-like protein.
       0.565
AMM34178.1
Membrane protein; Pfam:pfam11700 Vacuole effluxer Atg22 like.
 
     0.490
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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