Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AMM30995.1Pfam:pfam13515 Fusaric acid resistance protein-like. (381 aa)    
Predicted Functional Partners:
radA
DNA repair protein radA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
       0.642
AMM32878.1
Lipoate-protein ligase A.
  
     0.603
AMM30860.1
Lipoate--protein ligase.
  
     0.572
AMM30996.1
Phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.
       0.541
AMM34730.1
ABC transporter substrate-binding protein.
  
     0.523
AMM32578.1
Cytochrome P450.
 
     0.522
AMM31461.1
Pfam:pfam10724 Protein of unknown function (DUF2516).
 
     0.509
AMM32536.1
GCN5 family acetyltransferase; Pfam:pfam13549 ATP-grasp domain.
  
   
 0.468
AMM32518.1
Membrane protein.
  
     0.433
AMM32290.1
Hypothetical protein.
  
     0.426
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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