Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
AMM31047.1Zn-dependent hydrolase; Pfam:pfam00581 Rhodanese-like domain. (469 aa)    
Predicted Functional Partners:
AMM33594.1
Beta-lactamase; Pfam:pfam00581 Rhodanese-like domain.
 
0.962
AMM34185.1
Oxidoreductase; Pfam:pfam02913 FAD linked oxidases, C-terminal domain.
    
 0.921
ybeY
Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
 
 0.828
AMM33590.1
Permease; Pfam:pfam01925 Sulfite exporter TauE/SafE.
  
 0.827
AMM33591.1
Sulfurtransferase; Pfam:pfam00581 Rhodanese-like domain.
 
 
 0.801
rpsQ
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
   0.797
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
 
 0.754
AMM34252.1
Pfam:pfam00195 Chalcone and stilbene synthases, N-terminal domain.
  
 
   0.751
rsmH
Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
   0.728
AMM31294.1
Sulfite oxidase; Pfam:pfam00174 Oxidoreductase molybdopterin binding domain.
 
  
 0.699
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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