Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMM31096.1 | AMM31097.1 | SA2016_0399 | SA2016_0400 | ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | Sugar ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | 0.972 |
AMM31096.1 | AMM31098.1 | SA2016_0399 | SA2016_0401 | ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | Hypothetical protein. | 0.735 |
AMM31096.1 | AMM31099.1 | SA2016_0399 | SA2016_0402 | ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | LacI family transcriptional regulator; Pfam:pfam13377 Periplasmic binding protein-like domain. | 0.623 |
AMM31096.1 | AMM31100.1 | SA2016_0399 | SA2016_0403 | ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | Hypothetical protein. | 0.454 |
AMM31096.1 | AMM31101.1 | SA2016_0399 | SA2016_0404 | ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | Pfam:pfam07332 Protein of unknown function (DUF1469). | 0.454 |
AMM31096.1 | AMM31102.1 | SA2016_0399 | SA2016_0405 | ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | Pfam:pfam12277 Protein of unknown function (DUF3618). | 0.454 |
AMM31097.1 | AMM31096.1 | SA2016_0400 | SA2016_0399 | Sugar ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | 0.972 |
AMM31097.1 | AMM31098.1 | SA2016_0400 | SA2016_0401 | Sugar ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | Hypothetical protein. | 0.726 |
AMM31097.1 | AMM31099.1 | SA2016_0400 | SA2016_0402 | Sugar ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | LacI family transcriptional regulator; Pfam:pfam13377 Periplasmic binding protein-like domain. | 0.613 |
AMM31097.1 | AMM31100.1 | SA2016_0400 | SA2016_0403 | Sugar ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | Hypothetical protein. | 0.454 |
AMM31097.1 | AMM31101.1 | SA2016_0400 | SA2016_0404 | Sugar ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | Pfam:pfam07332 Protein of unknown function (DUF1469). | 0.454 |
AMM31097.1 | AMM31102.1 | SA2016_0400 | SA2016_0405 | Sugar ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | Pfam:pfam12277 Protein of unknown function (DUF3618). | 0.454 |
AMM31098.1 | AMM31096.1 | SA2016_0401 | SA2016_0399 | Hypothetical protein. | ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | 0.735 |
AMM31098.1 | AMM31097.1 | SA2016_0401 | SA2016_0400 | Hypothetical protein. | Sugar ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | 0.726 |
AMM31098.1 | AMM31099.1 | SA2016_0401 | SA2016_0402 | Hypothetical protein. | LacI family transcriptional regulator; Pfam:pfam13377 Periplasmic binding protein-like domain. | 0.645 |
AMM31098.1 | AMM31100.1 | SA2016_0401 | SA2016_0403 | Hypothetical protein. | Hypothetical protein. | 0.481 |
AMM31098.1 | AMM31101.1 | SA2016_0401 | SA2016_0404 | Hypothetical protein. | Pfam:pfam07332 Protein of unknown function (DUF1469). | 0.481 |
AMM31098.1 | AMM31102.1 | SA2016_0401 | SA2016_0405 | Hypothetical protein. | Pfam:pfam12277 Protein of unknown function (DUF3618). | 0.481 |
AMM31099.1 | AMM31096.1 | SA2016_0402 | SA2016_0399 | LacI family transcriptional regulator; Pfam:pfam13377 Periplasmic binding protein-like domain. | ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | 0.623 |
AMM31099.1 | AMM31097.1 | SA2016_0402 | SA2016_0400 | LacI family transcriptional regulator; Pfam:pfam13377 Periplasmic binding protein-like domain. | Sugar ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component. | 0.613 |
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