Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AMM31136.1Hypothetical protein. (252 aa)    
Predicted Functional Partners:
AMM31137.1
Hypothetical protein; Pfam:pfam04203 Sortase family.
 
   
 0.895
AMM32956.1
Peptidase C60 sortase A and B; Pfam:pfam04203 Sortase family.
 
   
 0.677
AMM33037.1
Hypothetical protein; Pfam:pfam00149 Calcineurin-like phosphoesterase.
 
   
 0.637
AMM31251.1
Peptidase S8.
  
     0.628
AMM31972.1
Peptidase S8.
  
     0.619
AMM34701.1
Peptidase S8.
  
     0.607
AMM31969.1
Peptidase S8.
  
     0.605
AMM31138.1
Hypothetical protein; Pfam:pfam13473 Cupredoxin-like domain.
       0.580
AMM33291.1
Pfam:pfam01580 FtsK/SpoIIIE family.
 
 
 
 0.543
AMM31135.1
Hypothetical protein.
       0.516
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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