Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM31186.1Pfam:pfam03992 Antibiotic biosynthesis monooxygenase. (106 aa)    
Predicted Functional Partners:
AMM31185.1
Hypothetical protein.
       0.705
AMM31184.1
MmcQ-like protein; Pfam:pfam04237 YjbR.
       0.703
AMM31183.1
CoA-binding domain protein; Pfam:pfam13380 CoA binding domain.
       0.690
AMM31181.1
Pfam:pfam04545 Sigma-70, region 4; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.638
AMM31182.1
Hypothetical protein.
       0.628
AMM32028.1
Membrane protein.
   
    0.482
AMM33725.1
Ankyrin repeat-containing protein; Pfam:pfam12796 Ankyrin repeats (3 copies).
 
     0.471
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
    0.410
AMM34113.1
Hypothetical protein.
 
    0.401
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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