Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM31229.1Pfam:pfam01261 Xylose isomerase-like TIM barrel. (255 aa)    
Predicted Functional Partners:
AMM31228.1
Oxidoreductase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
 
    0.954
AMM31227.1
Dehydrogenase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
 
    0.843
AMM31165.1
Oxidoreductase domain protein; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
 
    0.798
AMM31226.1
AP endonuclease; Pfam:pfam01261 Xylose isomerase-like TIM barrel.
 
     0.796
AMM31164.1
Hypothetical protein; Pfam:pfam06283 Trehalose utilisation.
 
   
 0.700
AMM31232.1
ABC transporter substrate-binding protein; Pfam:pfam01547 Bacterial extracellular solute-binding protein.
 
    0.660
AMM31231.1
Transporter; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
  
    0.644
AMM31230.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
  
    0.636
AMM31234.1
Oxidoreductase; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
  
    0.553
AMM31169.1
Xylulokinase; Pfam:pfam00370 FGGY family of carbohydrate kinases, N-terminal domain; Belongs to the FGGY kinase family.
  
 
 0.538
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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