STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM31293.1Pfam:pfam14016 Protein of unknown function (DUF4232). (211 aa)    
Predicted Functional Partners:
AMM31294.1
Sulfite oxidase; Pfam:pfam00174 Oxidoreductase molybdopterin binding domain.
       0.505
AMM33575.1
Nuclear export factor GLE1; Pfam:pfam07987 Domain of unkown function (DUF1775).
     0.456
AMM31751.1
Methicillin resistance protein; Pfam:pfam02388 FemAB family.
  
     0.430
AMM32340.1
Pfam:pfam12679 ABC-2 family transporter protein.
  
     0.426
AMM32342.1
Hypothetical protein.
  
     0.423
AMM32017.1
Pfam:pfam06737 Transglycosylase-like domain.
  
     0.412
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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