STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM31334.1Pfam:pfam02082 Transcriptional regulator. (150 aa)    
Predicted Functional Partners:
AMM31333.1
Hemoglobin-like flavoprotein; Pfam:pfam00970 Oxidoreductase FAD-binding domain; Belongs to the globin family.
   
 0.949
AMM34097.1
Hemin transporter; Pfam:pfam00970 Oxidoreductase FAD-binding domain; Belongs to the globin family.
   
 0.890
AMM33134.1
Cysteine desulfurase family protein; Pfam:pfam00266 Aminotransferase class-V.
  
  
 0.795
AMM33319.1
Cysteine desulfurase; Pfam:pfam00266 Aminotransferase class-V.
  
  
 0.795
AMM31335.1
Putative transcriptional regulator, LysR family; Pfam:pfam03466 LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
     
 0.784
AMM30892.1
Flavodoxin reductase family protein; Pfam:pfam00970 Oxidoreductase FAD-binding domain.
 
  
 0.635
AMM32151.1
Nitrogen fixation protein NifU; Pfam:pfam01592 NifU-like N terminal domain.
  
  
 0.608
AMM33793.1
Hypothetical protein.
  
  
 0.608
AMM31336.1
Membrane protein; Pfam:pfam00892 EamA-like transporter family.
     
 0.590
AMM33810.1
Uroporphyrinogen-III C-methyltransferase; Pfam:pfam00590 Tetrapyrrole (Corrin/Porphyrin) Methylases.
     
 0.586
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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