Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AMM31354.1Hypothetical protein. (130 aa)    
Predicted Functional Partners:
AMM31355.1
Hypothetical protein; Pfam:pfam13641 Glycosyltransferase like family 2.
      0.947
AMM31802.1
Creatininase; Pfam:pfam02633 Creatinine amidohydrolase.
  
  
 0.545
AMM32419.1
Tat (Twin-arginine translocation) pathway signal sequence domain protein.
  
 
 0.472
AMM32558.1
Signal transduction histidine kinase LytS.
  
 
 0.472
AMM32445.1
Chromosome partitioning protein ParA; Pfam:pfam01656 CobQ/CobB/MinD/ParA nucleotide binding domain.
  
 
 0.449
AMM32461.1
Chromosome partitioning ATPase; Pfam:pfam01656 CobQ/CobB/MinD/ParA nucleotide binding domain.
  
 
 0.449
AMM34408.1
Putative CobQ/CobB/MinD/ParA nucleotide binding protein; Pfam:pfam13614 AAA domain.
  
 
 0.449
AMM34734.1
Chromosome segregation ATPase; Pfam:pfam01656 CobQ/CobB/MinD/ParA nucleotide binding domain.
  
 
 0.449
AMM31185.1
Hypothetical protein.
  
 
 0.415
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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