| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMM30707.1 | AMM31309.1 | SA2016_0002 | SA2016_0617 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA ligase; Pfam:pfam01068 ATP dependent DNA ligase domain. | 0.828 |
| AMM30707.1 | AMM31340.1 | SA2016_0002 | SA2016_0650 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Hypothetical protein. | 0.745 |
| AMM30707.1 | AMM31373.1 | SA2016_0002 | SA2016_0683 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Pfam:pfam01028 Eukaryotic DNA topoisomerase I, catalytic core. | 0.709 |
| AMM30707.1 | AMM32527.1 | SA2016_0002 | SA2016_1853 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA topoisomerase IV subunit B; Pfam:pfam00204 DNA gyrase B. | 0.676 |
| AMM30707.1 | AMM32660.1 | SA2016_0002 | SA2016_1987 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | ATP-dependent DNA helicase RecQ; Pfam:pfam00270 DEAD/DEAH box helicase. | 0.745 |
| AMM30707.1 | AMM33053.1 | SA2016_0002 | SA2016_2384 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.940 |
| AMM30707.1 | AMM33336.1 | SA2016_0002 | SA2016_2671 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | ATP-dependent DNA helicase; Pfam:pfam00580 UvrD/REP helicase N-terminal domain. | 0.970 |
| AMM30707.1 | AMM34151.1 | SA2016_0002 | SA2016_3491 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Pfam:pfam13298 DNA polymerase Ligase (LigD). | 0.828 |
| AMM30707.1 | gyrB | SA2016_0002 | SA2016_0006 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. | 0.908 |
| AMM30707.1 | sbcD | SA2016_0002 | SA2016_2494 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.461 |
| AMM31309.1 | AMM30707.1 | SA2016_0617 | SA2016_0002 | DNA ligase; Pfam:pfam01068 ATP dependent DNA ligase domain. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.828 |
| AMM31309.1 | AMM31373.1 | SA2016_0617 | SA2016_0683 | DNA ligase; Pfam:pfam01068 ATP dependent DNA ligase domain. | Pfam:pfam01028 Eukaryotic DNA topoisomerase I, catalytic core. | 0.716 |
| AMM31309.1 | AMM33336.1 | SA2016_0617 | SA2016_2671 | DNA ligase; Pfam:pfam01068 ATP dependent DNA ligase domain. | ATP-dependent DNA helicase; Pfam:pfam00580 UvrD/REP helicase N-terminal domain. | 0.456 |
| AMM31309.1 | AMM34151.1 | SA2016_0617 | SA2016_3491 | DNA ligase; Pfam:pfam01068 ATP dependent DNA ligase domain. | Pfam:pfam13298 DNA polymerase Ligase (LigD). | 0.949 |
| AMM31309.1 | sbcD | SA2016_0617 | SA2016_2494 | DNA ligase; Pfam:pfam01068 ATP dependent DNA ligase domain. | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.490 |
| AMM31340.1 | AMM30707.1 | SA2016_0650 | SA2016_0002 | Hypothetical protein. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.745 |
| AMM31340.1 | AMM31373.1 | SA2016_0650 | SA2016_0683 | Hypothetical protein. | Pfam:pfam01028 Eukaryotic DNA topoisomerase I, catalytic core. | 0.670 |
| AMM31340.1 | AMM32527.1 | SA2016_0650 | SA2016_1853 | Hypothetical protein. | DNA topoisomerase IV subunit B; Pfam:pfam00204 DNA gyrase B. | 0.498 |
| AMM31340.1 | AMM32660.1 | SA2016_0650 | SA2016_1987 | Hypothetical protein. | ATP-dependent DNA helicase RecQ; Pfam:pfam00270 DEAD/DEAH box helicase. | 0.916 |
| AMM31340.1 | AMM33053.1 | SA2016_0650 | SA2016_2384 | Hypothetical protein. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.709 |
