Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM31385.1Pfam:pfam10094 Uncharacterized protein conserved in bacteria (DUF2332). (327 aa)    
Predicted Functional Partners:
AMM31384.1
Pfam:pfam00106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.709
AMM31383.1
Bifunctional protein RfaE, domain II; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
       0.567
AMM31386.1
Hypothetical protein; Pfam:pfam02720 Domain of unknown function (DUF222).
       0.509
AMM31377.1
D,D-heptose 1,7-bisphosphate phosphatase; Pfam:pfam13242 HAD-hyrolase-like.
       0.508
AMM31378.1
Lipopolysaccharide core heptosyltransferase RfaQ; Pfam:pfam01075 Glycosyltransferase family 9 (heptosyltransferase).
       0.508
AMM31379.1
Transferase; Pfam:pfam00534 Glycosyl transferases group 1.
       0.508
AMM31380.1
Glycosyltransferase; Pfam:pfam00534 Glycosyl transferases group 1.
       0.508
AMM31381.1
Phosphoheptose isomerase; Pfam:pfam13580 SIS domain.
       0.508
AMM31382.1
D-beta-D-heptose 1-phosphate adenosyltransferase; Pfam:pfam00294 pfkB family carbohydrate kinase.
       0.508
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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