STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM31421.1Pfam:pfam06289 Flagellar protein (FlbD). (112 aa)    
Predicted Functional Partners:
AMM31423.1
Hypothetical protein; Pfam:pfam13677 Membrane MotB of proton-channel complex MotA/MotB.
 
  
 0.950
AMM31422.1
Flagellar motor protein MotA; Pfam:pfam01618 MotA/TolQ/ExbB proton channel family.
 
    0.945
AMM31410.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.925
AMM31427.1
Hypothetical protein; Pfam:pfam02154 Flagellar motor switch protein FliM.
 
  
 0.882
AMM31411.1
Hypothetical protein; Pfam:pfam01706 FliG C-terminal domain.
 
  
 0.862
fliP
Flagellar biosynthesis protein flip; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
    0.857
AMM31413.1
Pfam:pfam00006 ATP synthase alpha/beta family, nucleotide-binding domain.
 
  
 0.852
AMM31432.1
Pfam:pfam01311 Bacterial export proteins, family 1.
 
    0.841
fliE
Pfam:pfam02049 Flagellar hook-basal body complex protein FliE.
 
  
 0.833
AMM31433.1
Type III secretion protein; Pfam:pfam01312 FlhB HrpN YscU SpaS Family.
 
  
 0.828
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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