Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM31426.1Hypothetical protein; Pfam:pfam05532 CsbD-like; Belongs to the UPF0337 (CsbD) family. (79 aa)    
Predicted Functional Partners:
AMM31024.1
Hypothetical protein; Pfam:pfam07311 Dodecin.
   
    0.537
AMM31427.1
Hypothetical protein; Pfam:pfam02154 Flagellar motor switch protein FliM.
       0.535
AMM31428.1
Flagellar motor switch protein FliN; Pfam:pfam01052 Surface presentation of antigens (SPOA).
       0.535
AMM32517.1
Peroxiredoxin; Pfam:pfam02566 OsmC-like protein.
  
  
 0.527
AMM33015.1
Peroxiredoxin; Pfam:pfam02566 OsmC-like protein.
  
  
 0.527
AMM31429.1
Pfam:pfam04347 Flagellar biosynthesis protein, FliO.
       0.518
fliP
Flagellar biosynthesis protein flip; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
       0.518
fliQ
Flagellar biosynthesis protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
       0.518
AMM31432.1
Pfam:pfam01311 Bacterial export proteins, family 1.
       0.518
AMM31433.1
Type III secretion protein; Pfam:pfam01312 FlhB HrpN YscU SpaS Family.
       0.518
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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