Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMM31429.1Pfam:pfam04347 Flagellar biosynthesis protein, FliO. (143 aa)    
Predicted Functional Partners:
AMM31427.1
Hypothetical protein; Pfam:pfam02154 Flagellar motor switch protein FliM.
  
 
 0.987
fliP
Flagellar biosynthesis protein flip; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
  
  
 0.987
fliQ
Flagellar biosynthesis protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.
  
  
 0.987
AMM31433.1
Type III secretion protein; Pfam:pfam01312 FlhB HrpN YscU SpaS Family.
  
  
 0.987
AMM31428.1
Flagellar motor switch protein FliN; Pfam:pfam01052 Surface presentation of antigens (SPOA).
  
  
 0.985
AMM31432.1
Pfam:pfam01311 Bacterial export proteins, family 1.
  
  
 0.974
AMM31434.1
Flagellar biosynthesis protein FlhA; Pfam:pfam00771 FHIPEP family.
  
  
 0.971
AMM31435.1
Hypothetical protein.
  
  
 0.969
AMM31411.1
Hypothetical protein; Pfam:pfam01706 FliG C-terminal domain.
  
  
 0.933
AMM31417.1
Pfam:pfam03963 Flagellar hook capping protein - N-terminal region.
  
  
 0.869
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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