Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMM31399.1 | AMM31400.1 | SA2016_0709 | SA2016_0710 | Pfam:pfam02623 FliW protein. | Flagellar hook-associated protein 3; Pfam:pfam00669 Bacterial flagellin N-terminal helical region. | 0.972 |
| AMM31399.1 | AMM31401.1 | SA2016_0709 | SA2016_0711 | Pfam:pfam02623 FliW protein. | Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family. | 0.940 |
| AMM31399.1 | AMM31405.1 | SA2016_0709 | SA2016_0715 | Pfam:pfam02623 FliW protein. | Pfam:pfam02561 Flagellar protein FliS. | 0.762 |
| AMM31399.1 | AMM31427.1 | SA2016_0709 | SA2016_0737 | Pfam:pfam02623 FliW protein. | Hypothetical protein; Pfam:pfam02154 Flagellar motor switch protein FliM. | 0.678 |
| AMM31399.1 | AMM31428.1 | SA2016_0709 | SA2016_0738 | Pfam:pfam02623 FliW protein. | Flagellar motor switch protein FliN; Pfam:pfam01052 Surface presentation of antigens (SPOA). | 0.463 |
| AMM31399.1 | csrA | SA2016_0709 | SA2016_0746 | Pfam:pfam02623 FliW protein. | Hypothetical protein; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.988 |
| AMM31400.1 | AMM31399.1 | SA2016_0710 | SA2016_0709 | Flagellar hook-associated protein 3; Pfam:pfam00669 Bacterial flagellin N-terminal helical region. | Pfam:pfam02623 FliW protein. | 0.972 |
| AMM31400.1 | AMM31401.1 | SA2016_0710 | SA2016_0711 | Flagellar hook-associated protein 3; Pfam:pfam00669 Bacterial flagellin N-terminal helical region. | Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family. | 0.991 |
| AMM31400.1 | AMM31405.1 | SA2016_0710 | SA2016_0715 | Flagellar hook-associated protein 3; Pfam:pfam00669 Bacterial flagellin N-terminal helical region. | Pfam:pfam02561 Flagellar protein FliS. | 0.992 |
| AMM31400.1 | AMM31427.1 | SA2016_0710 | SA2016_0737 | Flagellar hook-associated protein 3; Pfam:pfam00669 Bacterial flagellin N-terminal helical region. | Hypothetical protein; Pfam:pfam02154 Flagellar motor switch protein FliM. | 0.945 |
| AMM31400.1 | AMM31428.1 | SA2016_0710 | SA2016_0738 | Flagellar hook-associated protein 3; Pfam:pfam00669 Bacterial flagellin N-terminal helical region. | Flagellar motor switch protein FliN; Pfam:pfam01052 Surface presentation of antigens (SPOA). | 0.930 |
| AMM31400.1 | AMM31432.1 | SA2016_0710 | SA2016_0742 | Flagellar hook-associated protein 3; Pfam:pfam00669 Bacterial flagellin N-terminal helical region. | Pfam:pfam01311 Bacterial export proteins, family 1. | 0.870 |
| AMM31400.1 | AMM31433.1 | SA2016_0710 | SA2016_0743 | Flagellar hook-associated protein 3; Pfam:pfam00669 Bacterial flagellin N-terminal helical region. | Type III secretion protein; Pfam:pfam01312 FlhB HrpN YscU SpaS Family. | 0.906 |
| AMM31400.1 | AMM31434.1 | SA2016_0710 | SA2016_0744 | Flagellar hook-associated protein 3; Pfam:pfam00669 Bacterial flagellin N-terminal helical region. | Flagellar biosynthesis protein FlhA; Pfam:pfam00771 FHIPEP family. | 0.913 |
| AMM31400.1 | AMM31437.1 | SA2016_0710 | SA2016_0747 | Flagellar hook-associated protein 3; Pfam:pfam00669 Bacterial flagellin N-terminal helical region. | FliA/WhiG subfamily RNA polymerase sigma-28 subunit; Pfam:pfam04542 Sigma-70 region 2; Belongs to the sigma-70 factor family. | 0.866 |
| AMM31400.1 | csrA | SA2016_0710 | SA2016_0746 | Flagellar hook-associated protein 3; Pfam:pfam00669 Bacterial flagellin N-terminal helical region. | Hypothetical protein; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.816 |
| AMM31401.1 | AMM31399.1 | SA2016_0711 | SA2016_0709 | Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family. | Pfam:pfam02623 FliW protein. | 0.940 |
| AMM31401.1 | AMM31400.1 | SA2016_0711 | SA2016_0710 | Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family. | Flagellar hook-associated protein 3; Pfam:pfam00669 Bacterial flagellin N-terminal helical region. | 0.991 |
| AMM31401.1 | AMM31405.1 | SA2016_0711 | SA2016_0715 | Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family. | Pfam:pfam02561 Flagellar protein FliS. | 0.993 |
| AMM31401.1 | AMM31427.1 | SA2016_0711 | SA2016_0737 | Flagellar hook-associated protein FlgK; Belongs to the flagella basal body rod proteins family. | Hypothetical protein; Pfam:pfam02154 Flagellar motor switch protein FliM. | 0.984 |
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