Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
AMM31510.1Hypothetical protein. (295 aa)    
Predicted Functional Partners:
AMM31509.1
MFS superfamily proline/ betaine transporter; Pfam:pfam00083 Sugar (and other) transporter.
       0.773
AMM32865.1
Pfam:pfam02615 Malate/L-lactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
 
    0.527
AMM31508.1
Hypothetical protein; Pfam:pfam01614 Bacterial transcriptional regulator.
       0.495
AMM31994.1
Pfam:pfam03446 NAD binding domain of 6-phosphogluconate dehydrogenase.
 
     0.493
AMM31906.1
Pfam:pfam07700 Heme NO binding.
  
  
 0.465
AMM31504.1
Hypothetical protein; Pfam:pfam03737 Demethylmenaquinone methyltransferase.
 
     0.462
AMM31505.1
Hypothetical protein; Pfam:pfam09130 Domain of unknown function (DUF1932).
 
     0.445
AMM31642.1
Hypothetical protein; Pfam:pfam01136 Peptidase family U32.
  
     0.445
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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