STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM31559.1Pfam:pfam00480 ROK family. (395 aa)    
Predicted Functional Partners:
AMM32502.1
Polyphosphate glucokinase; Pfam:pfam00480 ROK family.
  
  
 0.718
AMM31560.1
Hypothetical protein.
       0.539
AMM31041.1
PTS lactose transporter subunit IIC; Pfam:pfam00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
  
  
 0.523
AMM31886.1
PTS sugar transporter subunit IIA; Pfam:pfam02378 Phosphotransferase system, EIIC.
  
 
 0.507
AMM31887.1
PTS sugar transporter; Pfam:pfam00367 phosphotransferase system, EIIB.
  
 
 0.506
AMM32601.1
Glutamate synthase; Pfam:pfam01645 Conserved region in glutamate synthase.
  
  
 0.479
AMM31554.1
Putative monophosphatase/phosphodiesterase bifunctional enzyme; Pfam:pfam00459 Inositol monophosphatase family.
       0.442
AMM31556.1
ABC-type transporter, integral membrane subunit; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
     
 0.430
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
     
 0.428
AMM31555.1
Pfam:pfam00005 ABC transporter; Belongs to the ABC transporter superfamily.
       0.421
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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