STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM31566.1Pfam:pfam00474 Sodium:solute symporter family. (510 aa)    
Predicted Functional Partners:
AMM30929.1
Pfam:pfam00171 Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
  
  
 0.956
AMM31565.1
Pfam:pfam11755 Protein of unknown function (DUF3311).
       0.787
AMM31564.1
Hypothetical protein; Pfam:pfam01546 Peptidase family M20/M25/M40.
  
    0.622
AMM31563.1
Hypothetical protein; Pfam:pfam01177 Asp/Glu/Hydantoin racemase.
     
 0.612
AMM31562.1
D-cysteine desulfhydrase; Pfam:pfam00291 Pyridoxal-phosphate dependent enzyme.
       0.608
AMM31347.1
Pfam:pfam02554 Carbon starvation protein CstA.
  
    0.577
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.554
AMM31259.1
Pfam:pfam11755 Protein of unknown function (DUF3311).
 
     0.507
AMM32429.1
Pfam:pfam00285 Citrate synthase; Belongs to the citrate synthase family.
   
  
 0.469
AMM33398.1
Pfam:pfam00285 Citrate synthase; Belongs to the citrate synthase family.
   
  
 0.469
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.