STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
AMM31587.1Hypothetical protein; Pfam:pfam13378 Enolase C-terminal domain-like; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (387 aa)    
Predicted Functional Partners:
AMM31586.1
Hypothetical protein; Pfam:pfam03446 NAD binding domain of 6-phosphogluconate dehydrogenase.
  
    0.786
AMM31588.1
Succinate-semialdehyde dehdyrogenase; Pfam:pfam00171 Aldehyde dehydrogenase family.
     
 0.784
AMM31585.1
Hypothetical protein; Pfam:pfam07729 FCD domain.
       0.781
AMM31119.1
Bifunctional D-altronate/D-mannonate dehydratase; Pfam:pfam02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain.
  
     0.744
AMM31589.1
MFS transporter; Pfam:pfam00083 Sugar (and other) transporter.
     
 0.674
AMM31584.1
Membrane protein; Pfam:pfam02656 Domain of unknown function (DUF202).
       0.443
menC
O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
  
     0.411
AMM34687.1
Helicase DnaB; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
    0.400
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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