Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM31652.1Pfam:pfam00106 short chain dehydrogenase. (257 aa)    
Predicted Functional Partners:
AMM31650.1
Arabinose import ATP-binding protein AraG; Pfam:pfam00005 ABC transporter.
       0.773
AMM31651.1
Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
       0.773
AMM33527.1
Hypothetical protein; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase.
  
     0.766
AMM31649.1
Hypothetical protein; Pfam:pfam13407 Periplasmic binding protein domain.
 
     0.739
AMM31647.1
Zn-dependent hydrolase, glyoxylase; Pfam:pfam00753 Metallo-beta-lactamase superfamily.
   
   0.664
AMM31648.1
Oxidoreductase domain protein; Pfam:pfam01408 Oxidoreductase family, NAD-binding Rossmann fold.
       0.649
AMM31646.1
Enoyl-CoA hydratase/carnithine racemase; Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.596
AMM30803.1
Benzoate 1,2-dioxygenase electron transfer component; Pfam:pfam00175 Oxidoreductase NAD-binding domain.
 
 
 0.595
AMM32563.1
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
  
 0.434
AMM34730.1
ABC transporter substrate-binding protein.
   
 0.434
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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