STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM31659.1Hypothetical protein; Pfam:pfam00480 ROK family. (321 aa)    
Predicted Functional Partners:
AMM31167.1
MarR family transcriptional regulator; Pfam:pfam00480 ROK family.
  
     0.775
AMM32465.1
Glucokinase; Pfam:pfam00480 ROK family.
 
     0.775
AMM30873.1
Pfam:pfam00480 ROK family.
  
     0.774
AMM32502.1
Polyphosphate glucokinase; Pfam:pfam00480 ROK family.
  
   
 0.665
AMM31661.1
Hypothetical protein; Pfam:pfam00480 ROK family.
 
    
0.640
AMM31660.1
Putative fructoselysine transporter FrlA; Pfam:pfam13520 Amino acid permease.
  
    0.514
nagB-2
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
     
 0.481
AMM31886.1
PTS sugar transporter subunit IIA; Pfam:pfam02378 Phosphotransferase system, EIIC.
  
 
 0.480
AMM31887.1
PTS sugar transporter; Pfam:pfam00367 phosphotransferase system, EIIB.
  
 
 0.480
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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