Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM31671.1Pfam:pfam00005 ABC transporter. (255 aa)    
Predicted Functional Partners:
AMM31672.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 0.997
AMM31502.1
Polar amino acid ABC transporter, inner membrane subunit; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 0.990
AMM33830.1
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 0.975
AMM31673.1
ABC transporter substrate-binding protein; Pfam:pfam00497 Bacterial extracellular solute-binding proteins, family 3.
 
 
 0.960
AMM33895.1
Amino ABC transporter, permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 0.955
AMM33344.1
Putative ABC transporter substrate-binding/permease protein; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 0.946
AMM34229.1
Polar amino acid ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 0.925
AMM33390.1
Amino acid ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 0.921
AMM34230.1
Amino acid ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 0.920
AMM33391.1
Amino acid ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
 
 0.914
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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