Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM31725.1Pfam:pfam01226 Formate/nitrite transporter. (269 aa)    
Predicted Functional Partners:
AMM32112.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
  
 0.792
AMM31728.1
Pfam:pfam08310 LGFP repeat.
 
     0.646
AMM33810.1
Uroporphyrinogen-III C-methyltransferase; Pfam:pfam00590 Tetrapyrrole (Corrin/Porphyrin) Methylases.
     
 0.569
AMM31726.1
Pfam:pfam03807 NADP oxidoreductase coenzyme F420-dependent.
       0.508
AMM31724.1
Hypothetical protein.
       0.503
AMM32532.1
Pfam:pfam00005 ABC transporter.
 
    0.484
AMM34306.1
Transcriptional regulator; Pfam:pfam12728 Helix-turn-helix domain.
  
     0.465
AMM31727.1
Hypothetical protein; Pfam:pfam13581 Histidine kinase-like ATPase domain.
     
 0.456
AMM32601.1
Glutamate synthase; Pfam:pfam01645 Conserved region in glutamate synthase.
   
  
 0.445
AMM31326.1
Pyridine nucleotide-disulfide oxidoreductase dimerization region; Pfam:pfam07992 Pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.431
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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