Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM31796.1Pfam:pfam00196 Bacterial regulatory proteins, luxR family. (567 aa)    
Predicted Functional Partners:
AMM32048.1
Pfam:pfam07730 Histidine kinase.
 
 
 0.742
AMM33499.1
Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.658
AMM34705.1
Pfam:pfam07730 Histidine kinase.
 
 
 0.657
AMM32049.1
LuxR family transcriptional regulator; Pfam:pfam00072 Response regulator receiver domain.
  
     0.650
AMM31613.1
LuxR family transcriptional regulator; Pfam:pfam00072 Response regulator receiver domain.
  
     0.603
AMM33926.1
LuxR family transcriptional regulator; Pfam:pfam00072 Response regulator receiver domain.
  
     0.586
AMM31795.1
Portal protein; Pfam:pfam13738 Pyridine nucleotide-disulphide oxidoreductase.
 
     0.583
AMM33573.1
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain protein; Pfam:pfam00072 Response regulator receiver domain.
  
     0.579
AMM31798.1
Cytosine deaminase; Pfam:pfam00383 Cytidine and deoxycytidylate deaminase zinc-binding region.
  
    0.577
AMM30797.1
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain protein; Pfam:pfam00072 Response regulator receiver domain.
  
     0.576
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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