STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM31804.1Pfam:pfam07905 Purine catabolism regulatory protein-like family. (501 aa)    
Predicted Functional Partners:
AMM31803.1
Pfam:pfam02133 Permease for cytosine/purines, uracil, thiamine, allantoin; Belongs to the purine-cytosine permease (2.A.39) family.
 
     0.801
AMM34220.1
Pfam:pfam07905 Purine catabolism regulatory protein-like family.
  
     0.752
AMM31675.1
Hypothetical protein; Pfam:pfam13556 PucR C-terminal helix-turn-helix domain.
  
     0.597
AMM31805.1
Pfam:pfam09860 Uncharacterized protein conserved in bacteria (DUF2087).
       0.459
AMM30776.1
AsnC family transcriptional regulator; Pfam:pfam13404 AsnC-type helix-turn-helix domain.
  
    0.447
AMM34512.1
Pfam:pfam00324 Amino acid permease.
 
     0.443
AMM31802.1
Creatininase; Pfam:pfam02633 Creatinine amidohydrolase.
       0.412
AMM34307.1
PucR family transcriptional regulator.
  
     0.411
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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