Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMM31809.1Pfam:pfam02538 Hydantoinase B/oxoprolinase. (1284 aa)    
Predicted Functional Partners:
AMM31807.1
N-carbamoylsarcosine amidase; Pfam:pfam00857 Isochorismatase family.
 
     0.827
AMM31808.1
MFS transporter; Pfam:pfam07690 Major Facilitator Superfamily.
 
     0.739
AMM33285.1
Hypothetical protein; Pfam:pfam01497 Periplasmic binding protein.
     
 0.569
AMM31810.1
ArsR family transcriptional regulator; Pfam:pfam09339 IclR helix-turn-helix domain.
     
 0.491
AMM34623.1
Pfam:pfam01177 Asp/Glu/Hydantoin racemase.
 
   
 0.458
AMM31803.1
Pfam:pfam02133 Permease for cytosine/purines, uracil, thiamine, allantoin; Belongs to the purine-cytosine permease (2.A.39) family.
 
     0.457
AMM34631.1
MFS transporter; Pfam:pfam07690 Major Facilitator Superfamily.
 
     0.426
AMM34470.1
Hypothetical protein; Pfam:pfam00857 Isochorismatase family.
 
     0.422
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.
  
  
 0.421
AMM33872.1
hydroxymethylglutaryl-CoA lyase; Pfam:pfam00682 HMGL-like.
  
  
 0.421
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.