STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM31851.1XRE family transcriptional regulator; Pfam:pfam07883 Cupin domain. (191 aa)    
Predicted Functional Partners:
AMM31507.1
Hypothetical protein; Pfam:pfam04199 Putative cyclase.
  
    0.658
AMM31596.1
Pfam:pfam05853 Prokaryotic protein of unknown function (DUF849).
 
    0.635
AMM30856.1
Pfam:pfam05853 Prokaryotic protein of unknown function (DUF849).
 
    0.627
AMM31854.1
Agmatinase; Pfam:pfam00491 Arginase family; Belongs to the arginase family.
 
   
 0.511
AMM31815.1
Ferredoxin; Pfam:pfam01571 Aminomethyltransferase folate-binding domain.
     
 0.455
AMM32601.1
Glutamate synthase; Pfam:pfam01645 Conserved region in glutamate synthase.
     
 0.455
AMM34446.1
Transcriptional regulator, XRE family; Pfam:pfam07883 Cupin domain.
 
  
0.454
AMM30890.1
Sarcosine dehydrogenase; Pfam:pfam01571 Aminomethyltransferase folate-binding domain; Belongs to the GcvT family.
  
  
 0.439
AMM34106.1
FAD dependent oxidoreductase-aminomethyl transferase; Pfam:pfam01571 Aminomethyltransferase folate-binding domain; Belongs to the GcvT family.
  
  
 0.439
AMM31850.1
Membrane protein; Pfam:pfam01988 VIT family.
       0.426
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.