STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM31860.1Oxidoreductase; Pfam:pfam13561 Enoyl-(Acyl carrier protein) reductase. (247 aa)    
Predicted Functional Partners:
AMM31861.1
Pfam:pfam00106 short chain dehydrogenase.
 
    
0.797
AMM31864.1
Pfam:pfam07876 Stress responsive A/B Barrel Domain.
  
    0.781
AMM31862.1
Putative oxidoreductase; Pfam:pfam00890 FAD binding domain.
 
    0.778
AMM31865.1
Fumarate reductase; Pfam:pfam00890 FAD binding domain.
 
    0.778
AMM31863.1
Major facilitator transporter; Pfam:pfam00083 Sugar (and other) transporter.
       0.773
AMM30803.1
Benzoate 1,2-dioxygenase electron transfer component; Pfam:pfam00175 Oxidoreductase NAD-binding domain.
 
 
 0.748
AMM31866.1
Pfam:pfam01614 Bacterial transcriptional regulator.
  
    0.544
AMM34484.1
Putative sulfatase family protein; Pfam:pfam00884 Sulfatase.
   
 
 0.542
AMM31867.1
Flavin-nucleotide-binding protein; Pfam:pfam12900 Pyridoxamine 5'-phosphate oxidase.
  
    0.483
AMM33043.1
ACP S-malonyltransferase; Pfam:pfam00698 Acyl transferase domain.
 
 
 0.474
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.