Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM31915.1Amine oxidase; Pfam:pfam01593 Flavin containing amine oxidoreductase. (445 aa)    
Predicted Functional Partners:
AMM33937.1
Pfam:pfam00850 Histone deacetylase domain.
   
 0.778
AMM31914.1
Pfam:pfam05899 Protein of unknown function (DUF861).
       0.732
AMM31913.1
Pfam:pfam00440 Bacterial regulatory proteins, tetR family.
 
     0.690
AMM32731.1
Hypothetical protein; Pfam:pfam14269 Arylsulfotransferase (ASST).
  
     0.623
AMM32018.1
DNA/RNA helicase; Pfam:pfam00176 SNF2 family N-terminal domain.
    
 0.622
AMM30707.1
DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
   
  
 0.555
AMM30820.1
Pfam:pfam00494 Squalene/phytoene synthase.
   
  
 0.528
AMM31253.1
Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
   
  
 0.521
AMM31443.1
Two component system histidine kinase; Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
   
  
 0.521
AMM31465.1
Pfam:pfam02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
   
  
 0.521
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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