STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM31948.1Mannose-6-phosphate isomerase; Pfam:pfam07883 Cupin domain. (137 aa)    
Predicted Functional Partners:
AMM31946.1
Hypothetical protein; Pfam:pfam09339 IclR helix-turn-helix domain.
     
 0.779
AMM31947.1
MFS transporter; Pfam:pfam00083 Sugar (and other) transporter.
  
    0.775
AMM31945.1
Antitoxin ParD1; Pfam:pfam03693 Uncharacterized protein family (UPF0156).
  
    0.652
AMM31944.1
Pfam:pfam05016 Plasmid stabilisation system protein; Belongs to the RelE toxin family.
     
 0.605
AMM31950.1
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Pfam:pfam03328 HpcH/HpaI aldolase/citrate lyase family; Belongs to the HpcH/HpaI aldolase family.
  
    0.583
AMM31949.1
Hypothetical protein.
       0.548
AMM34655.1
ArsR family transcriptional regulator; Pfam:pfam00581 Rhodanese-like domain.
  
    0.482
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.