STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM31990.1Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family. (371 aa)    
Predicted Functional Partners:
AMM31992.1
Pfam:pfam00005 ABC transporter.
 
 0.999
AMM31993.1
Leucine/isoleucine/valine transporter ATP-binding subunit; Pfam:pfam00005 ABC transporter.
 
 0.999
AMM31991.1
ABC transporter permease; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
AMM32082.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; Pfam:pfam00005 ABC transporter.
 
 0.997
AMM33260.1
Pfam:pfam00005 ABC transporter.
 
 0.997
AMM31989.1
Amino acid-binding protein; Pfam:pfam13458 Periplasmic binding protein.
 
 0.995
AMM33259.1
Pfam:pfam00005 ABC transporter.
 
 0.995
AMM33258.1
Inner-membrane translocator; Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.990
AMM32083.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; Pfam:pfam00005 ABC transporter.
  
 0.988
AMM32085.1
Pfam:pfam02653 Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.979
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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