STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM31998.1Pfam:pfam04303 PrpF protein. (381 aa)    
Predicted Functional Partners:
AMM31997.1
Pfam:pfam01571 Aminomethyltransferase folate-binding domain; Belongs to the GcvT family.
 
  
  0.971
AMM31141.1
Pfam:pfam04909 Amidohydrolase.
 
  
 0.959
AMM31143.1
4-oxalomesaconate hydratase; Pfam:pfam04909 Amidohydrolase.
 
  
 0.952
AMM31996.1
Glycine cleavage system protein T; Pfam:pfam01571 Aminomethyltransferase folate-binding domain; Belongs to the GcvT family.
 
  
  0.932
AMM32003.1
Glycine cleavage system protein T; Pfam:pfam01571 Aminomethyltransferase folate-binding domain; Belongs to the GcvT family.
 
  
  0.905
AMM31999.1
Hypothetical protein; Pfam:pfam00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
 
    0.850
AMM34091.1
Phenol 2-monooxygenase; Pfam:pfam01494 FAD binding domain.
  
  
 0.830
AMM34045.1
3-hydroxyisobutyryl-CoA hydrolase; Pfam:pfam13766 2-enoyl-CoA Hydratase C-terminal region.
   
 
  0.808
AMM34226.1
3-hydroxyisobutyryl-CoA hydrolase; Pfam:pfam13766 2-enoyl-CoA Hydratase C-terminal region.
   
 
  0.808
AMM34529.1
Pfam:pfam00171 Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
   
 
  0.808
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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