Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AMM32339.1Pfam:pfam05193 Peptidase M16 inactive domain; Belongs to the peptidase M16 family. (456 aa)    
Predicted Functional Partners:
AMM32747.1
Ubiquinol-cytochrome C reductase; Pfam:pfam00355 Rieske [2Fe-2S] domain.
   
 0.976
AMM32262.1
Hypothetical protein; Pfam:pfam01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit.
   
 0.972
atpH
ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
 0.947
atpA
ATP synthase F0F1 subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
   
 0.932
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
 
 0.918
AMM32060.1
Succinate dehydrogenase; Pfam:pfam13085 2Fe-2S iron-sulfur cluster binding domain.
   
 
 0.888
AMM32752.1
Pfam:pfam00116 Cytochrome C oxidase subunit II, periplasmic domain.
  
 
 0.837
AMM32745.1
Pfam:pfam00510 Cytochrome c oxidase subunit III.
   
 
 0.831
AMM32751.1
Cytochrome C oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
   
 
 0.831
AMM30803.1
Benzoate 1,2-dioxygenase electron transfer component; Pfam:pfam00175 Oxidoreductase NAD-binding domain.
   
 
 0.825
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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