STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM32407.1Acetyltransferase; Pfam:pfam00132 Bacterial transferase hexapeptide (six repeats). (180 aa)    
Predicted Functional Partners:
AMM32408.1
Acetyltransferase, GNAT family protein; Pfam:pfam13527 Acetyltransferase (GNAT) domain.
 
     0.735
AMM33553.1
Putative glucosyltransferase; Pfam:pfam02397 Bacterial sugar transferase.
  
  
 0.720
AMM32409.1
Pfam:pfam01546 Peptidase family M20/M25/M40.
  
    0.680
AMM33271.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.626
AMM32170.1
Exopolysaccharide biosynthesis protein, WecB/TagA/CpsF family; Pfam:pfam03808 Glycosyl transferase WecB/TagA/CpsF family.
  
  
 0.508
AMM31530.1
Pfam:pfam01041 DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.506
AMM32157.1
Pfam:pfam01041 DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.506
AMM32159.1
Erythromycin biosynthesis sensory transduction protein eryC1; Pfam:pfam01041 DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.506
argH
Pfam:pfam00206 Lyase.
     
 0.486
argG
Pfam:pfam00764 Arginosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
     
 0.470
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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