STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM32442.1Chemotaxis protein CheY; Pfam:pfam00072 Response regulator receiver domain. (241 aa)    
Predicted Functional Partners:
AMM32443.1
Histidine kinase; Pfam:pfam14827 Sensory domain of two-component sensor kinase.
 
 0.985
AMM34084.1
Sensor protein CitS; Pfam:pfam14827 Sensory domain of two-component sensor kinase.
 
 0.939
AMM32444.1
C4-dicarboxylate transporter; Pfam:pfam00375 Sodium:dicarboxylate symporter family; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
   
 0.798
AMM32441.1
Hypothetical protein.
       0.565
AMM32440.1
Pfam:pfam00313 'Cold-shock' DNA-binding domain.
   
   0.401
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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