STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM32593.1Hypothetical protein. (214 aa)    
Predicted Functional Partners:
AMM32199.1
Ferredoxin; Pfam:pfam13247 4Fe-4S dicluster domain.
  
 
 0.723
AMM32662.1
Pfam:pfam13247 4Fe-4S dicluster domain.
  
 
 0.723
AMM32746.1
Cystathionine beta-lyase; Pfam:pfam00034 Cytochrome c.
 
 
 0.691
hisI
phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.
       0.663
AMM32601.1
Glutamate synthase; Pfam:pfam01645 Conserved region in glutamate synthase.
  
  
 0.637
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.632
AMM33310.1
Hypothetical protein.
  
     0.608
AMM32592.1
Hypothetical protein.
       0.601
AMM31103.1
Hypothetical protein.
  
     0.577
AMM32540.1
Pfam:pfam11268 Protein of unknown function (DUF3071).
  
  
 0.542
Your Current Organism:
Sinomonas atrocyanea
NCBI taxonomy Id: 37927
Other names: ATCC 13752, Arthrobacter atricyaneus, Arthrobacter atrocyaneus, CIP 102365, DSM 20127, KCTC 3377, LMG 3814, LMG:3814, NBRC 12956, S. atrocyanea
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